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Medhat Mahmoud

MethPhaser: methylation-based haplotype phasing of human genomes
Rescuing low frequency variants within intra-host viral populations directly from Oxford Nanopore sequencing data
An international virtual hackathon to build tools for the analysis of structural variants within species ranging from coronaviruses to vertebrates
Rescuing Low Frequency Variants within Intra-Host Viral Populations directly from Oxford Nanopore sequencing data
SARS-CoV-2 genomic diversity and the implications for qRT-PCR diagnostics and transmission
Vulcan: Improved long-read mapping and structural variant calling via dual-mode alignment
Hidden genomic diversity of SARS-CoV-2: implications for qRT-PCR diagnostics and transmission (preprint)
Methods developed during the first National Center for Biotechnology Information Structural Variation Codeathon at Baylor College of Medicine

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